Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
total RNA-seq
100
ATAC-seq
3
single cell RNA-seq
2
RNA microarray
pCHi-C
Assay category
198
Transcription
100
DNA accessibility
DNA binding
Date released
705
February, 2021
290
May, 2020
276
August, 2021
217
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
68
October, 2019
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
29
March, 2020
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
August, 2022
1
December, 2018
Available data
238
bam
238
bigWig
197
tsv
Organism
300
Homo sapiens
Biosample type
152
primary cell
146
tissue
2
in vitro differentiated cells
Organ
148
liver
6
epithelium
3
kidney
Project
255
AMP
45
T1D
Genome assembly (visualization)
238
hg19
193
GRCh38
Lab
255
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
4
audit script error
assay_slims!
DNA binding
assay_title!
pCHi-C
month_released!
August, 2022
BIOSAMPLE
ASSAY
300 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
RNA microarray
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
hepatocyte
5
B cell
2
2
+ See 25 more…
tissue
liver
143
kidney
1
kidney interstitium
1
renal glomerulus
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
Download