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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
148
ATAC-seq
Assay category
148
DNA accessibility
DNA binding
Date released
64
August, 2021
64
February, 2023
20
May, 2022
Available data
bam
1284
bigWig
1119
tsv
490
fastq
475
bed narrowPeak
228
bigBed narrowPeak
204
bed bed3+
199
bed broadPeak
197
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
148
Homo sapiens
Biosample type
146
tissue
2
in vitro differentiated cells
Organ
64
kidney
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
20
liver
12
epithelium
connective tissue
1
adipose tissue
Project
148
AMP
Genome assembly (visualization)
99
GRCh38
49
hg19
Lab
64
Katalin Susztak, Upenn
62
AMP-T2D consortium
20
Karen Mohlke, UNC
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
assay_title!
snDrop-seq
files.file_type!
bam
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
148 results
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Clear Filters
ATAC-seq
tissue
kidney
64
coronary artery
35
liver
20
retina
15
pigmented layer of retina
12
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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