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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1277
total RNA-seq
106
single cell RNA-seq
25
ATAC-seq
18
small RNA-seq
17
WGBS
2
Hi-C
Assay category
25
DNA accessibility
Date released
11
May, 2023
7
August, 2020
3
September, 2020
2
March, 2019
1
July, 2019
1
October, 2017
Available data
bed narrowPeak
111
bam
64
xls
51
bigWig
42
fastq
24
bigBed narrowPeak
2
bed bed3
bed broadPeak
Organism
25
Homo sapiens
Biosample type
15
tissue
10
primary cell
Organ
12
pancreas
11
kidney
10
epithelium
2
brain
Project
15
AMP
10
HPAP
Genome assembly (visualization)
81
hg19
25
GRCh38
Lab
11
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
2
AMP-T2D consortium
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
assay_slims!
DNA binding
files.file_type!
bed broadPeak
bed narrowPeak
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ATAC-seq
tissue
kidney
11
islet of Langerhans
2
cerebellum (Hemisphere)
1
posterior cingulate cortex
1
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
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