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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1527
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
0
ChIP-seq
Assay category
DNA binding
1
Transcription
Date released
2
February, 2023
1
March, 2023
Organism
2
Homo sapiens
Biosample type
2
cell line
1
stem cell
Project
2
T1D
1
community
Lab
2
Kyle Gaulton, UCSD
1
Anna Gloyn, Oxford
assay_slims!
DNA binding
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
3 results
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HiChIP
CRISPRi RNA-seq
cell line
EndoC_BH1
2
stem cell
SB Ad3.1
1