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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
55
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
68
Transcription
Date released
89
February, 2021
57
August, 2021
6
May, 2022
1
October, 2022
Available data
198
tsv
196
fastq
153
txt
153
zippedFastqFolder
122
bed narrowPeak
64
xls
57
bigWig
49
bam
23
bed bed3+
23
bed broadPeak
23
bigBed broadPeak
23
bigBed narrowPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Organism
152
Homo sapiens
Biosample type
152
tissue
1
cell line
Organ
88
bone element
62
kidney
6
pancreas
skeleton
Project
153
AMP
Genome assembly (visualization)
hg19
Lab
90
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
assay_slims!
DNA binding
assembly!
hg19
month_released!
March, 2019
organ_slims!
skeleton
BIOSAMPLE
ASSAY
153 results
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RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
13
islet of Langerhans
6
cell line
MIN6
1
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