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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
2
RRBS
2
pCHi-C
2
total RNA-seq
1
WGBS
1
single cell RNA-seq
Assay category
DNA binding
4
3D chromatin structure
3
DNA methylation
3
Transcription
Date released
5
July, 2019
2
August, 2017
2
February, 2020
2
March, 2020
1
May, 2022
Available data
4
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
212
kidney
177
pancreas
145
epithelium
109
heart
85
bone element
43
liver
27
brain
20
eye
20
lung
14
connective tissue
13
blood vessel
13
vasculature
11
adipose tissue
11
musculature of body
8
blood
8
bodily fluid
8
limb
4
artery
3
spleen
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
hg19
40
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
assembly!
hg19
month_released!
February, 2023
BIOSAMPLE
ASSAY
12 results
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Hi-C
RRBS
pCHi-C
total RNA-seq
WGBS
single cell RNA-seq
tissue
gastrocnemius medialis
4
1
skeletal muscle tissue
2
1
gastric (mucosa of stomach)
1
left ventricle myocardium
1
muscle of leg
1
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