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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ATAC-seq
23
DNase-seq
17
WGBS
1
Hi-C
Assay category
145
DNA accessibility
DNA binding
17
DNA methylation
1
3D chromatin structure
Date released
64
August, 2021
35
February, 2023
23
June, 2019
11
May, 2023
9
July, 2019
7
August, 2020
7
November, 2018
3
September, 2020
2
August, 2017
1
March, 2023
1
October, 2017
Available data
122
bed narrowPeak
64
xls
52
bigWig
42
bam
23
bed bed3+
23
bed broadPeak
23
bigBed broadPeak
23
bigBed narrowPeak
20
fastq
17
bed bedMethyl
17
bigBed bedMethyl
1
hic
Organism
163
Homo sapiens
Biosample type
144
tissue
18
primary cell
1
cell line
Organ
82
kidney
44
heart
37
blood vessel
37
vasculature
35
artery
16
epithelium
16
pancreas
12
brain
3
connective tissue
2
adipose tissue
2
spleen
1
limb
1
liver
1
musculature of body
Project
152
AMP
10
HPAP
1
ITG
Genome assembly (visualization)
hg19
1855
GRCh38
5
hg18
Lab
77
AMP-T2D consortium
75
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
1
ITG
assay_slims!
DNA binding
assembly!
hg19
month_released!
November, 2020
BIOSAMPLE
ASSAY
163 results
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Clear Filters
ATAC-seq
DNase-seq
WGBS
Hi-C
tissue
kidney
75
coronary artery
35
body of pancreas
2
2
heart
2
1
adipose tissue
2
+ See 21 more…
primary cell
pancreatic alpha cell
7
pancreatic beta cell
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac fibroblast
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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