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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
47
ATAC-seq
6
WGBS
1
small RNA-seq
Assay category
DNA binding
70
Transcription
47
DNA accessibility
6
DNA methylation
Date released
60
February, 2021
35
February, 2023
21
July, 2019
3
May, 2021
2
March, 2020
2
October, 2019
Available data
118
bam
110
bigWig
77
bed narrowPeak
70
tsv
30
bed bed3+
30
bed broadPeak
bigBed broadPeak
30
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
123
Homo sapiens
Biosample type
60
cell line
58
tissue
4
primary cell
1
in vitro differentiated cells
Organ
482
connective tissue
471
pancreas
404
adipose tissue
181
epithelium
166
liver
123
heart
105
blood vessel
105
vasculature
99
artery
88
kidney
66
bone element
14
brain
14
embryo
13
limb
8
skeleton
7
musculature of body
5
nerve
3
spleen
1
pericardium
Project
123
AMP
Genome assembly (visualization)
123
GRCh38
87
hg19
Lab
123
AMP-T2D consortium
assay_slims!
DNA binding
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
123 results
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total RNA-seq
ATAC-seq
WGBS
small RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
36
heart left ventricle
3
2
2
heart
4
1
1
heart right ventricle
1
2
right atrium auricular region
2
1
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primary cell
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
in vitro differentiated cells
cardiac fibroblast
1
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