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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
DNase-seq
1
Hi-C
Assay category
202
DNA accessibility
DNA binding
1
3D chromatin structure
Date released
187
June, 2019
9
November, 2018
6
October, 2019
1
November, 2020
Available data
1733
bam
1674
bigWig
1400
tsv
413
bed narrowPeak
299
fastq
229
bigBed narrowPeak
204
bed broadPeak
203
bed bed3+
203
bigBed broadPeak
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
Organism
203
Homo sapiens
Biosample type
176
tissue
25
primary cell
2
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
vein
1
spleen
Project
203
AMP
Genome assembly (visualization)
203
GRCh38
195
hg19
Lab
203
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
assay_slims!
DNA binding
organ_slims!
vein
BIOSAMPLE
ASSAY
203 results
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Clear Filters
DNase-seq
Hi-C
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 16 more…
cell line
Panc1
1
1
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