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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
total RNA-seq
96
ATAC-seq
16
snATAC-seq
1
pCHi-C
Assay category
186
Transcription
112
DNA accessibility
DNA binding
Date released
579
February, 2021
283
May, 2020
273
August, 2021
200
May, 2022
194
February, 2023
183
June, 2019
162
July, 2018
148
May, 2021
115
August, 2017
106
July, 2019
61
October, 2019
59
September, 2020
49
April, 2018
47
September, 2023
45
March, 2020
41
September, 2018
39
November, 2019
24
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
15
February, 2018
15
May, 2023
10
November, 2020
8
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
2
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
225
bam
225
bigWig
185
tsv
Organism
299
Homo sapiens
Biosample type
151
tissue
147
primary cell
1
cell line
Organ
144
liver
8
blood
8
bodily fluid
8
pancreas
Project
242
AMP
57
T1D
Genome assembly (visualization)
225
hg19
184
GRCh38
Lab
242
AMP-T2D consortium
57
Kyle Gaulton, UCSD
Audit category:
inconsistent ontology term
assay_slims!
DNA binding
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
299 results
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Clear Filters
total RNA-seq
ATAC-seq
snATAC-seq
pCHi-C
tissue
liver
143
islet of Langerhans
4
pancreas
4
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
peripheral blood mononuclear cell
8
B cell
2
2
+ See 23 more…
cell line
HepG2
1
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