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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
6
pCHi-C
4
DNase-seq
1
RRBS
Assay category
32
DNA accessibility
19
Transcription
DNA binding
1
DNA methylation
Date released
31
February, 2023
19
October, 2019
4
June, 2019
2
March, 2020
1
February, 2020
1
July, 2019
Available data
31
bed narrowPeak
7
tsv
4
bam
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
58
Homo sapiens
Biosample type
56
tissue
2
primary cell
Organ
662
pancreas
523
connective tissue
417
adipose tissue
329
epithelium
295
kidney
257
heart
238
liver
133
vasculature
131
blood vessel
107
artery
75
bone element
67
brain
56
eye
56
musculature of body
55
limb
20
lung
18
ureter
16
skeleton
13
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
Project
58
AMP
Genome assembly (visualization)
32
hg19
4
GRCh38
Lab
58
AMP-T2D consortium
assay_slims!
DNA binding
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
58 results
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ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
RRBS
tissue
retina
15
3
3
islet of Langerhans
1
14
4
pigmented layer of retina
12
2
sigmoid colon
1
small intestine
1
primary cell
retinal pigment epithelial cell
1
1
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