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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
26
total RNA-seq
9
DNase-seq
6
WGBS
1
FAIRE-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
49
DNA accessibility
27
Transcription
DNA binding
6
DNA methylation
Date released
545
February, 2021
229
August, 2021
163
June, 2019
143
May, 2020
120
July, 2018
108
August, 2017
77
February, 2023
77
July, 2019
66
May, 2022
47
October, 2019
40
November, 2019
39
May, 2021
36
March, 2020
25
February, 2020
16
November, 2018
15
May, 2023
8
October, 2017
6
April, 2018
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
48
bed narrowPeak
40
bam
40
fastq
36
bigWig
10
bed bed3+
10
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
7
txt
6
bed bedMethyl
6
bigBed bedMethyl
Organism
82
Homo sapiens
Biosample type
82
tissue
1
cell line
1
primary cell
Organ
43
liver
31
pancreas
3
spleen
2
brain
2
musculature of body
1
adipose tissue
1
connective tissue
Project
82
AMP
Genome assembly (visualization)
49
hg19
15
GRCh38
Lab
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
18
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
82 results
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ATAC-seq
total RNA-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
snATAC-seq
tissue
liver
20
20
2
islet of Langerhans
18
6
body of pancreas
2
2
pancreas
2
1
spleen
1
2
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