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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
17
WGBS
Assay category
35
DNA methylation
Date released
22
July, 2019
7
November, 2018
6
August, 2017
Available data
1809
bam
1774
bigWig
1591
tsv
499
fastq
461
bed narrowPeak
237
bigBed narrowPeak
216
bed bed3+
203
bed broadPeak
202
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
35
Homo sapiens
Biosample type
25
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
stem cell
lab.title!
Mark McCarthy, Oxford
organ_slims!
eye
BIOSAMPLE
ASSAY
35 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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