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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
16
pCHi-C
5
ATAC-seq
Assay category
DNA binding
58
Transcription
5
DNA accessibility
Date released
134
May, 2022
84
February, 2023
79
May, 2021
59
September, 2020
45
February, 2021
45
May, 2020
20
August, 2021
8
January, 2021
7
August, 2020
6
November, 2020
5
March, 2023
3
October, 2022
Available data
58
bigWig
51
bam
51
tsv
2
bed bed3+
Organism
79
Homo sapiens
Biosample type
69
primary cell
10
in vitro differentiated cells
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
67
T1D
12
AMP
Genome assembly (visualization)
58
hg19
51
GRCh38
Lab
AMP-T2D consortium
79
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
tissue
files.file_type!
ibed
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
79 results
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total RNA-seq
pCHi-C
ATAC-seq
primary cell
monocyte
51
1
CD8-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
5
5
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