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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
DNase-seq
2
ATAC-seq
1
FAIRE-seq
Assay category
DNA binding
32
DNA accessibility
Date released
24
June, 2019
7
October, 2019
1
August, 2017
November, 2020
Available data
623
bam
617
bigWig
520
tsv
fastq
153
zippedFastqFolder
101
bed narrowPeak
56
bigBed narrowPeak
42
bed bed3+
29
bed broadPeak
29
bigBed broadPeak
13
bedpe bed3+
12
hic
11
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
txt
3
cool
2
csv
2
ibed
1
tar
1
vcf
Organism
32
Homo sapiens
Biosample type
tissue
28
primary cell
2
cell line
2
in vitro differentiated cells
Organ
18
epithelium
11
kidney
7
connective tissue
7
vasculature
5
blood vessel
5
brain
3
heart
3
vein
2
liver
1
eye
1
musculature of body
1
pancreas
Project
32
AMP
Genome assembly (visualization)
28
GRCh38
25
hg19
Lab
32
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
tissue
files.file_type!
fastq
month_released!
November, 2020
BIOSAMPLE
ASSAY
32 results
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DNase-seq
ATAC-seq
FAIRE-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
See all biosamples
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