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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
MPRA
Assay category
3
DNA accessibility
Date released
3
February, 2023
1
October, 2022
Available data
533
bam
519
bigWig
428
tsv
344
fastq
153
zippedFastqFolder
103
bed narrowPeak
57
bigBed narrowPeak
41
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
13
bedpe bed3+
12
hic
bed bedMethyl
11
bigBed bedMethyl
7
bed bed3
7
bed bedgraph
5
hdf5
4
txt
3
cool
2
csv
2
ibed
1
tar
1
vcf
Organism
3
Homo sapiens
Biosample type
tissue
3
in vitro differentiated cells
1
cell line
Project
4
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
biosample_type!
tissue
files.file_type!
bed bedMethyl
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
MPRA
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
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