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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
1
3D chromatin structure
1
DNA accessibility
Date released
2
October, 2019
1
February, 2021
Available data
84
tsv
81
bam
74
bigWig
10
bed narrowPeak
7
fastq
3
bed bed3+
1
bed bed3
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
bigBed broadPeak
1
bigBed narrowPeak
1
hdf5
1
hic
1
txt
1
vcf
Organism
3
Homo sapiens
Biosample type
177
tissue
16
primary cell
6
in vitro differentiated cells
3
cell line
Organ
2
pancreas
1
liver
Project
3
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
3
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_slims!
DNA binding
organ_slims!
epithelium
BIOSAMPLE
ASSAY
3 results
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DNase-seq
Hi-C
pCHi-C
cell line
Panc1
1
1
HepG2
1
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