Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
16
pCHi-C
8
snATAC-seq
Assay category
DNA binding
98
Transcription
8
DNA accessibility
Date released
69
May, 2021
45
May, 2020
8
January, 2021
Available data
98
bigWig
96
bam
96
tsv
2
bed bed3+
Organism
122
Homo sapiens
Biosample type
122
primary cell
52
tissue
10
in vitro differentiated cells
5
cell line
Organ
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
Project
120
T1D
2
AMP
Genome assembly (visualization)
98
hg19
96
GRCh38
Lab
324
Klaus Kaestner, Upenn
310
AMP-T2D consortium
122
Kyle Gaulton, UCSD
1
ITG
Audit category:
5
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bigBed narrowPeak
month_released!
January, 2018
BIOSAMPLE
ASSAY
122 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
pCHi-C
snATAC-seq
primary cell
monocyte
53
1
peripheral blood mononuclear cell
8
CD8-positive, alpha-beta T cell
4
1
B cell
2
1
naive B cel
2
1
+ See 31 more…
See all biosamples
Download