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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
4
DNase-seq
4
Hi-C
1
FAIRE-seq
Assay category
DNA binding
13
DNA accessibility
4
3D chromatin structure
Date released
8
January, 2021
4
October, 2019
2
July, 2019
2
June, 2019
1
March, 2020
Available data
7
bigWig
6
bed bed3+
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
hdf5
2
hic
1
bedpe bed3+
1
tar
Organism
17
Homo sapiens
Biosample type
21
tissue
17
primary cell
1
cell line
Organ
314
epithelium
276
pancreas
27
connective tissue
21
kidney
14
vasculature
12
brain
11
blood vessel
10
liver
8
blood
8
bodily fluid
heart
5
vein
4
musculature of body
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
Project
9
AMP
8
T1D
Genome assembly (visualization)
8
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
audit script error
assay_slims!
DNA binding
organ_slims!
heart
BIOSAMPLE
ASSAY
17 results
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Clear Filters
snATAC-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
peripheral blood mononuclear cell
8
endothelial cell of umbilical vein
2
2
1
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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