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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
49
total RNA-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
81
DNA accessibility
60
Transcription
1
3D chromatin structure
Date released
128
August, 2021
14
May, 2023
Available data
64
bed narrowPeak
64
xls
57
txt
1
hic
Organism
142
Homo sapiens
Biosample type
142
tissue
Organ
142
kidney
Project
142
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
1549
AMP-T2D consortium
142
Katalin Susztak, Upenn
52
Kyle Gaulton, UCSD
47
KPMP
40
Karen Mohlke, UNC
19
Xin Sun, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
3
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_slims!
DNA binding
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
142 results
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ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
75
49
11
6
1
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