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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Date released
545
February, 2021
228
August, 2021
163
June, 2019
143
May, 2020
120
July, 2018
108
August, 2017
95
February, 2023
77
July, 2019
66
May, 2022
47
September, 2023
46
October, 2019
40
May, 2021
39
November, 2019
31
March, 2020
25
February, 2020
19
April, 2020
16
November, 2018
15
May, 2023
8
January, 2021
8
October, 2017
6
April, 2018
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
100
fastq
95
bam
95
bigWig
89
tsv
5
bed bedMethyl
5
bigBed bedMethyl
4
bed narrowPeak
4
bigBed narrowPeak
Organism
108
Homo sapiens
Biosample type
108
tissue
6
primary cell
1
in vitro differentiated cells
Organ
91
pancreas
7
adipose tissue
7
connective tissue
6
liver
4
musculature of body
Project
108
AMP
Genome assembly (visualization)
96
hg19
94
GRCh38
Lab
108
AMP-T2D consortium
assay_slims!
DNA binding
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
108 results
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total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
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