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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
18
pCHi-C
9
total RNA-seq
1
DNAme array
Assay category
DNA binding
21
DNA accessibility
9
Transcription
1
DNA methylation
Date released
251
August, 2021
205
February, 2023
176
May, 2022
143
February, 2021
59
September, 2020
58
May, 2020
48
March, 2020
48
May, 2021
47
September, 2023
41
October, 2019
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
August, 2017
10
November, 2020
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
October, 2017
1
September, 2018
Available data
bam
183
bigWig
176
tsv
13
bed narrowPeak
4
fastq
2
bed bed3+
1
bedpe bed3+
Organism
49
Homo sapiens
Biosample type
20
primary cell
16
cell line
11
in vitro differentiated cells
2
tissue
Organ
17
pancreas
16
epithelium
2
connective tissue
1
adipose tissue
1
bone element
1
bone marrow
1
thymus
Project
32
AMP
17
T1D
Genome assembly (visualization)
7
hg19
Lab
30
Kyle Gaulton, UCSD
19
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bam
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
1
2
monocyte
1
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
5
white fat cell
1
tissue
pancreas
1
thymus
1
See all biosamples
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