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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
8
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
8
DNA accessibility
Date released
150
February, 2021
4
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
bed bed3
Organism
155
Homo sapiens
Biosample type
154
tissue
1
primary cell
Organ
728
pancreas
524
connective tissue
417
adipose tissue
395
epithelium
302
kidney
259
heart
238
liver
155
bone element
134
vasculature
131
blood vessel
107
artery
67
brain
56
eye
56
limb
56
musculature of body
20
lung
18
ureter
14
embryo
12
skeleton
8
blood
8
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
154
AMP
1
T1D
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
154
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bed bed3
month_released!
January, 2018
BIOSAMPLE
ASSAY
155 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 9 more…
primary cell
megakaryocyte
1
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