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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
total RNA-seq
3
ATAC-seq
3
WGBS
3
small RNA-seq
1
RNA microarray
1
pCHi-C
Assay category
401
Transcription
DNA binding
3
DNA accessibility
3
DNA methylation
Date released
386
February, 2021
12
July, 2019
3
August, 2017
2
February, 2020
1
August, 2021
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
November, 2019
1
October, 2019
Available data
406
bigWig
405
bam
401
tsv
fastq
5
bed narrowPeak
4
bigBed narrowPeak
2
bed bed3+
2
bed bedMethyl
bed broadPeak
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
408
Homo sapiens
Biosample type
407
tissue
2
primary cell
Organ
499
connective tissue
409
adipose tissue
380
pancreas
224
kidney
224
liver
193
heart
179
epithelium
151
bone element
88
vasculature
87
blood vessel
68
artery
34
brain
22
musculature of body
21
eye
20
limb
20
lung
10
embryo
9
blood
9
bodily fluid
8
skeleton
6
nerve
3
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
409
AMP
Genome assembly (visualization)
402
hg19
400
GRCh38
Lab
409
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bed broadPeak
fastq
month_released!
February, 2023
BIOSAMPLE
ASSAY
409 results
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total RNA-seq
ATAC-seq
WGBS
small RNA-seq
RNA microarray
pCHi-C
tissue
adipose tissue
382
2
1
subcutaneous adipose tissue
7
1
1
omental fat pad
5
1
subcutaneous abdominal adipose tissue
3
visceral abdominal adipose tissue
3
+ See 1 more…
primary cell
mesenchymal stem cell of adipose
1
1
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