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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
total RNA-seq
100
ATAC-seq
1
pCHi-C
Assay category
195
Transcription
100
DNA accessibility
DNA binding
Date released
689
February, 2021
291
May, 2020
221
May, 2021
200
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
105
August, 2017
101
July, 2019
60
March, 2020
59
September, 2020
57
October, 2019
49
April, 2018
47
September, 2023
27
September, 2018
25
February, 2020
22
November, 2019
19
April, 2020
16
January, 2021
15
February, 2018
15
May, 2023
14
November, 2020
10
December, 2019
8
January, 2018
8
November, 2018
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2017
2
October, 2018
1
August, 2022
1
December, 2018
Available data
238
bam
238
bigWig
194
tsv
5
fastq
Organism
296
Homo sapiens
Biosample type
147
primary cell
143
tissue
6
cell line
Organ
149
liver
Project
251
AMP
45
T1D
Genome assembly (visualization)
238
hg19
193
GRCh38
Lab
251
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bed narrowPeak
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
296 results
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total RNA-seq
ATAC-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
tissue
liver
143
cell line
HepG2
5
1
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