Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
snATAC-seq
9
single cell RNA-seq
5
total RNA-seq
1
pCHi-C
Assay category
14
Transcription
DNA binding
10
DNA accessibility
Date released
19
April, 2020
4
October, 2019
1
February, 2020
1
March, 2020
Available data
7
bam
7
bigWig
6
tsv
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
24
Homo sapiens
Biosample type
25
tissue
Organ
654
pancreas
514
connective tissue
412
adipose tissue
341
epithelium
211
liver
182
heart
158
kidney
151
bone element
76
vasculature
75
blood vessel
58
artery
35
brain
25
eye
24
musculature of body
20
lung
15
embryo
12
limb
9
blood
9
bodily fluid
skeleton
5
nerve
3
spleen
2
intestine
2
pericardium
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
LungMap
6
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
19
Xin Sun, UCSD
6
AMP-T2D consortium
assay_slims!
DNA binding
files.file_type!
bed narrowPeak
organ_slims!
skeleton
BIOSAMPLE
ASSAY
25 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
lung
10
9
1
tibial nerve
5
Download