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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
17
pCHi-C
7
total RNA-seq
1
DNAme array
Assay category
DNA binding
29
DNA accessibility
7
Transcription
1
DNA methylation
Date released
259
August, 2021
202
February, 2023
180
May, 2022
161
February, 2021
58
May, 2020
56
September, 2020
54
May, 2021
47
September, 2023
43
March, 2020
41
October, 2019
28
November, 2019
25
February, 2020
23
July, 2019
19
April, 2020
16
January, 2021
15
May, 2023
14
August, 2017
11
November, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
186
bam
bigWig
173
tsv
13
bed narrowPeak
2
bed bed3+
Organism
54
Homo sapiens
Biosample type
31
primary cell
16
cell line
5
in vitro differentiated cells
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
37
AMP
17
T1D
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
31
AMP-T2D consortium
23
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
bigWig
lab.title!
Stephen Parker, UMich
organ_slims!
gonad
BIOSAMPLE
ASSAY
54 results
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ATAC-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
monocyte
13
1
1
1
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
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cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
tissue
pancreas
1
thymus
1
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