Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
44
ATAC-seq
2
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
46
DNA accessibility
DNA binding
Date released
60
February, 2021
35
February, 2023
3
July, 2019
October, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
65
bam
58
tsv
57
bigWig
46
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
104
Homo sapiens
Biosample type
60
cell line
42
tissue
2
primary cell
Organ
517
connective tissue
410
adipose tissue
389
pancreas
293
kidney
256
heart
224
liver
193
epithelium
159
bone element
127
vasculature
124
blood vessel
104
artery
63
brain
55
musculature of body
46
limb
37
eye
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
1
vein
Project
104
AMP
Genome assembly (visualization)
100
GRCh38
65
hg19
Lab
104
AMP-T2D consortium
assay_slims!
DNA binding
files.file_type!
fastq
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
October, 2019
BIOSAMPLE
ASSAY
104 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
2
pulmonary artery
2
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download