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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
total RNA-seq
12
ATAC-seq
1
GRO-seq
Assay category
DNA binding
18
Transcription
12
DNA accessibility
Date released
8
August, 2021
8
February, 2021
8
February, 2023
4
February, 2018
2
May, 2021
1
January, 2018
Available data
22
bam
15
bigWig
14
tsv
8
bed narrowPeak
5
fastq
4
bed bed3
4
txt
Organism
31
Homo sapiens
Biosample type
16
tissue
8
cell line
7
in vitro differentiated cells
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
234
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
31
AMP
Genome assembly (visualization)
26
hg19
22
GRCh38
1
hg18
Lab
31
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
files.file_type!
tagAlign bed3+
month_released!
January, 2019
BIOSAMPLE
ASSAY
31 results
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total RNA-seq
ATAC-seq
GRO-seq
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
See all biosamples
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