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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ATAC-seq
Assay category
71
DNA accessibility
Date released
64
August, 2021
4
February, 2021
3
February, 2023
Available data
1807
bam
1771
bigWig
1600
tsv
493
fastq
486
bed narrowPeak
241
bigBed narrowPeak
220
bed bed3+
207
bed broadPeak
206
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
71
Homo sapiens
Biosample type
64
tissue
7
in vitro differentiated cells
Organ
64
kidney
4
connective tissue
Project
71
AMP
Genome assembly (visualization)
64
GRCh38
7
hg19
Lab
64
Katalin Susztak, Upenn
4
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
month_released!
October, 2017
target.investigated_as!
histone
BIOSAMPLE
ASSAY
71 results
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ATAC-seq
tissue
kidney
64
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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