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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ATAC-seq
2
DNase-seq
Assay category
DNA binding
4
DNA accessibility
Date released
2
August, 2017
1
March, 2019
1
October, 2017
Available data
1814
bam
1779
bigWig
1600
tsv
501
fastq
492
bed narrowPeak
241
bigBed narrowPeak
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
bed bed3
8
csv
7
bed bedgraph
5
hdf5
3
cool
2
ibed
1
bedpe
1
tar
1
vcf
Organism
4
Homo sapiens
Biosample type
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
2
pancreas
1
connective tissue
Project
4
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
2
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
assay_slims!
DNA binding
files.file_type!
bed bed3
bed bed3+
tagAlign bed3+
BIOSAMPLE
ASSAY
4 results
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Clear Filters
ATAC-seq
DNase-seq
tissue
islet of Langerhans
2
in vitro differentiated cells
adipocyte
1
primary cell
skeletal muscle myoblast
1
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