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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
8
total RNA-seq
3
ATAC-seq
2
small RNA-seq
1
WGBS
Assay category
DNA binding
40
DNA accessibility
10
Transcription
1
DNA methylation
Date released
33
June, 2019
10
October, 2019
5
July, 2019
2
March, 2020
1
January, 2018
Available data
56
bam
51
bigWig
45
bed narrowPeak
38
bed bed3+
37
bed broadPeak
37
bigBed broadPeak
37
bigBed narrowPeak
16
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
51
Homo sapiens
Biosample type
48
tissue
3
primary cell
Organ
495
connective tissue
462
pancreas
406
adipose tissue
200
epithelium
190
liver
110
heart
92
kidney
76
vasculature
74
blood vessel
60
artery
58
bone element
50
brain
43
limb
41
musculature of body
18
ureter
15
embryo
7
nerve
4
eye
4
spleen
3
vein
1
blood
1
bodily fluid
1
pericardium
0
small intestine
Project
51
AMP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
51 results
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DNase-seq
total RNA-seq
ATAC-seq
small RNA-seq
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
tibial nerve
2
4
1
skeletal muscle tissue
1
1
1
tibial artery
2
1
+ See 3 more…
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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