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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
5
ATAC-seq
4
RRBS
4
WGBS
3
DNase-seq
1
FAIRE-seq
Assay category
DNA binding
89
Transcription
9
DNA accessibility
8
DNA methylation
Date released
106
August, 2017
76
February, 2023
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2018
41
September, 2020
24
May, 2022
18
November, 2018
15
February, 2018
8
October, 2017
7
August, 2020
5
January, 2018
5
January, 2019
5
September, 2017
4
August, 2018
3
June, 2018
2
October, 2018
1
December, 2018
1
March, 2019
Available data
106
fastq
101
bam
101
bigWig
89
tsv
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
Organism
106
Homo sapiens
Biosample type
100
tissue
5
primary cell
1
in vitro differentiated cells
Organ
94
pancreas
5
connective tissue
4
adipose tissue
3
epithelium
3
liver
2
musculature of body
Project
106
AMP
Genome assembly (visualization)
102
hg19
98
GRCh38
Lab
106
AMP-T2D consortium
assay_slims!
DNA binding
organ_slims!
ureter
BIOSAMPLE
ASSAY
106 results
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total RNA-seq
ATAC-seq
RRBS
WGBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
1
1
adipose tissue
3
liver
1
1
skeletal muscle tissue
2
right lobe of liver
1
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primary cell
skeletal muscle myoblast
1
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
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