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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
WGBS
3
single cell RNA-seq
2
ATAC-seq
2
DNase-seq
1
pCHi-C
Assay category
DNA binding
4
DNA accessibility
3
DNA methylation
3
Transcription
Date released
5
August, 2017
2
July, 2018
1
April, 2018
1
August, 2018
1
November, 2018
1
October, 2017
Available data
437
bigWig
433
bam
420
tsv
17
bed narrowPeak
16
bed bed3+
13
bigBed narrowPeak
11
fastq
9
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
11
Homo sapiens
Biosample type
6
tissue
3
primary cell
2
in vitro differentiated cells
Organ
324
pancreas
185
epithelium
13
liver
11
connective tissue
7
adipose tissue
5
embryo
4
spleen
3
brain
2
musculature of body
Project
11
AMP
Genome assembly (visualization)
9
GRCh38
7
hg19
Lab
11
AMP-T2D consortium
assay_slims!
DNA binding
organ_slims!
bone element
vein
BIOSAMPLE
ASSAY
11 results
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Clear Filters
WGBS
single cell RNA-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
adipose tissue
3
omental fat pad
1
1
subcutaneous adipose tissue
1
primary cell
pancreatic stellate cell
3
in vitro differentiated cells
adipocyte
1
white fat cell
1
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