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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
1643
bam
1589
bigWig
1426
tsv
488
fastq
bed narrowPeak
235
bigBed narrowPeak
213
bed bed3+
203
bed broadPeak
201
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tar
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
1
connective tissue
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
assay_slims!
DNA binding
files.file_type!
bed narrowPeak
lab.title!
KPMP
organ_slims!
liver
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cell line
Panc1
1
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