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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
single cell RNA-seq
6
WGBS
5
GRO-seq
2
ATAC-seq
2
DNase-seq
Assay category
DNA binding
37
Transcription
6
DNA methylation
4
DNA accessibility
Date released
21
April, 2018
11
July, 2018
5
January, 2018
5
November, 2018
4
August, 2017
1
August, 2018
1
June, 2018
1
March, 2019
1
October, 2017
1
September, 2018
1
September, 2020
Available data
51
fastq
46
bigWig
42
bam
34
tsv
4
bed bedMethyl
4
bigBed bedMethyl
3
bed broadPeak
2
bed bed3+
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
csv
1
zippedFastqFolder
Organism
52
Homo sapiens
Biosample type
37
primary cell
10
tissue
4
in vitro differentiated cells
1
stem cell
Organ
29
pancreas
26
epithelium
3
adipose tissue
3
connective tissue
2
brain
2
liver
1
embryo
Project
51
AMP
1
HPAP
Genome assembly (visualization)
41
GRCh38
36
hg19
5
hg18
Lab
50
AMP-T2D consortium
1
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
52 results
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single cell RNA-seq
WGBS
GRO-seq
ATAC-seq
DNase-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic cell
6
pancreatic delta cell
5
pancreatic polypeptide-secreting cell
5
+ See 4 more…
tissue
adipose tissue
3
liver
1
1
pancreas
2
brain
1
cerebellum (Hemisphere)
1
+ See 1 more…
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
See all biosamples
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