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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 37total RNA-seq
  • 28single cell RNA-seq
  • 26ATAC-seq
  • 5WGBS
Assay category
  • DNA binding
  • 65Transcription
  • 26DNA accessibility
  • 5DNA methylation
Date released
  • 24May, 2022
  • 18September, 2020
  • 17April, 2018
  • 15February, 2018
  • 8July, 2018
  • 6August, 2017
  • 6October, 2017
  • 1June, 2018
  • 1November, 2018
Available data
  • 94fastq
  • 76bam
  • 52bigWig
  • 41tsv
  • 26bed narrowPeak
  • 6txt
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bigBed narrowPeak
  • 2zippedFastqFolder
Organism
  • 96Homo sapiens
Biosample type
  • 44primary cell
  • 37tissue
  • 15in vitro differentiated cells
Organ
  • 63pancreas
  • 34epithelium
  • 5adipose tissue
  • 5connective tissue
  • 4embryo
  • 2liver
  • 1spleen
Project
  • 78AMP
  • 18HPAP
Genome assembly (visualization)
  • 67hg19
  • 52GRCh38
Lab
  • 54AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
  • 18Klaus Kaestner, Upenn
assay_slims!
  • DNA binding
BIOSAMPLE
ASSAY

96 results

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total RNA-seq
single cell RNA-seq
ATAC-seq
WGBS
primary cell
pancreatic alpha cell154
pancreatic beta cell14
mesenchymal cell4
pancreatic cell4
pancreatic delta cell3
tissue
islet of Langerhans618
body of pancreas4
adipose tissue3
liver1
omental fat pad1
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
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