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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ATAC-seq
16
snATAC-seq
5
GRO-seq
5
total RNA-seq
1
FAIRE-seq
1
Hi-C
1
single cell RNA-seq
Assay category
DNA binding
66
DNA accessibility
6
Transcription
1
3D chromatin structure
Date released
39
May, 2022
16
February, 2021
5
January, 2018
5
January, 2019
5
September, 2017
3
August, 2017
1
December, 2018
1
March, 2019
1
November, 2018
1
October, 2017
1
September, 2020
Available data
40
zippedFastqFolder
38
fastq
20
bigWig
16
bam
9
bed narrowPeak
9
bigBed narrowPeak
5
tsv
1
bed broadPeak
Organism
78
Homo sapiens
Biosample type
64
primary cell
6
cell line
4
in vitro differentiated cells
3
tissue
1
stem cell
Organ
49
pancreas
47
epithelium
6
liver
1
brain
1
embryo
Project
56
HPAP
22
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
5
hg18
Lab
56
Klaus Kaestner, Upenn
21
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
16
audit script error
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
78 results
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ATAC-seq
snATAC-seq
GRO-seq
total RNA-seq
FAIRE-seq
Hi-C
single cell RNA-seq
primary cell
pancreatic alpha cell
25
Langerhans cell
16
1
pancreatic beta cell
16
pancreatic acinar cell
6
cell line
HepG2
5
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
cerebellum (Hemisphere)
1
islet of Langerhans
1
pancreas
1
stem cell
hESC
1
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