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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
DNA binding
6
DNA accessibility
1
3D chromatin structure
Date released
60
February, 2021
35
February, 2023
11
July, 2019
7
October, 2019
6
August, 2021
5
June, 2019
4
March, 2020
3
February, 2020
Available data
6
bam
6
bed narrowPeak
6
bigWig
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
hic
1
tar
Organism
7
Homo sapiens
Biosample type
4
primary cell
3
tissue
Organ
19
eye
11
epithelium
10
limb
9
kidney
7
blood vessel
7
nerve
7
vasculature
5
pancreas
4
vein
3
artery
3
connective tissue
3
heart
2
brain
2
liver
1
adipose tissue
1
pituitary gland
1
skin of body
Project
7
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA binding
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
7 results
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DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
1
1
tissue
tibial artery
2
1
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