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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
10
ATAC-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA binding
14
DNA accessibility
Date released
60
February, 2021
February, 2023
3
July, 2019
3
October, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
68
bam
60
bigWig
58
tsv
14
bed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
Organism
72
Homo sapiens
Biosample type
60
cell line
10
tissue
2
primary cell
Organ
665
pancreas
517
connective tissue
417
adipose tissue
336
epithelium
302
kidney
239
liver
223
heart
151
bone element
99
vasculature
96
blood vessel
72
artery
67
brain
57
musculature of body
56
limb
25
eye
20
lung
18
ureter
15
embryo
9
blood
9
bodily fluid
8
nerve
8
skeleton
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
72
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
72
AMP-T2D consortium
assay_slims!
DNA binding
month_released!
August, 2020
February, 2023
BIOSAMPLE
ASSAY
72 results
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total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
1
2
tibial artery
1
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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