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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
56
Transcription
49
DNA accessibility
DNA binding
Date released
60
February, 2021
35
February, 2023
3
July, 2019
3
October, 2019
2
August, 2021
February, 2020
2
June, 2019
Available data
68
bam
60
bigWig
56
tsv
49
bed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
Organism
105
Homo sapiens
Biosample type
60
cell line
43
tissue
2
primary cell
Organ
722
pancreas
529
connective tissue
416
adipose tissue
395
epithelium
302
kidney
256
heart
233
liver
159
bone element
131
vasculature
128
blood vessel
105
artery
56
brain
55
eye
55
musculature of body
53
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
7
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
105
AMP
Genome assembly (visualization)
103
GRCh38
68
hg19
Lab
105
AMP-T2D consortium
assay_slims!
DNA binding
month_released!
February, 2020
January, 2019
March, 2019
BIOSAMPLE
ASSAY
105 results
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total RNA-seq
ATAC-seq
DNase-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
36
2
tibial artery
1
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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