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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
67
total RNA-seq
13
ATAC-seq
2
DNase-seq
1
pCHi-C
Assay category
67
Transcription
DNA binding
15
DNA accessibility
Date released
150
February, 2021
8
February, 2023
7
October, 2019
1
February, 2020
1
May, 2021
Available data
88
txt
73
bam
65
bigWig
63
tsv
11
bed narrowPeak
4
bed bed3
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
167
Homo sapiens
Biosample type
166
tissue
1
primary cell
Organ
728
pancreas
530
connective tissue
417
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
56
eye
56
limb
56
musculature of body
20
lung
18
ureter
16
skeleton
14
embryo
8
blood
8
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
166
AMP
1
T1D
Genome assembly (visualization)
77
hg19
73
GRCh38
Lab
166
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
assay_slims!
DNA binding
month_released!
January, 2018
BIOSAMPLE
ASSAY
167 results
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RNA microarray
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
bone element
84
bone tissue
58
tibial nerve
5
1
2
acetabular part of hip bone
1
1
ilium
1
1
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primary cell
megakaryocyte
1
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