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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
9
WGBS
6
RRBS
5
ATAC-seq
5
DNase-seq
3
single cell RNA-seq
1
FAIRE-seq
1
pCHi-C
Assay category
DNA binding
92
Transcription
15
DNA methylation
11
DNA accessibility
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
110
fastq
104
bam
104
bigWig
92
tsv
10
bed narrowPeak
10
bigBed narrowPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
Organism
119
Homo sapiens
Biosample type
108
tissue
9
primary cell
2
in vitro differentiated cells
Organ
97
pancreas
9
connective tissue
8
adipose tissue
6
epithelium
6
liver
4
musculature of body
Project
119
AMP
Genome assembly (visualization)
106
hg19
101
GRCh38
Lab
119
AMP-T2D consortium
assay_slims!
DNA binding
month_released!
March, 2020
BIOSAMPLE
ASSAY
119 results
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total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
single cell RNA-seq
FAIRE-seq
pCHi-C
tissue
islet of Langerhans
89
1
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 2 more…
primary cell
pancreatic alpha cell
1
2
skeletal muscle myoblast
1
2
pancreatic acinar cell
1
1
pancreatic beta cell
1
in vitro differentiated cells
adipocyte
1
white fat cell
1
See all biosamples
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