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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
38
DNA accessibility
20
Transcription
DNA binding
2
3D chromatin structure
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2021
8
October, 2017
7
August, 2020
7
January, 2018
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
51
bam
32
bigWig
31
bed narrowPeak
20
tsv
12
fastq
5
bigBed narrowPeak
2
bedpe bed3+
2
hic
Organism
60
Homo sapiens
Biosample type
40
tissue
12
primary cell
5
in vitro differentiated cells
3
cell line
Organ
54
pancreas
15
epithelium
1
adipose tissue
1
connective tissue
Project
53
AMP
7
HPAP
Genome assembly (visualization)
58
GRCh38
53
hg19
Lab
53
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
9
inconsistent ontology term
assay_slims!
DNA binding
organ_slims!
blood
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
primary cell
pancreatic alpha cell
7
pancreatic beta cell
4
pancreatic acinar cell
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
1
1
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