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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
6
single cell RNA-seq
2
STARR-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
DNA binding
15
Transcription
1
3D chromatin structure
1
DNA sequencing
Date released
144
May, 2020
63
February, 2021
40
May, 2022
35
February, 2023
20
July, 2019
19
August, 2021
9
October, 2019
7
June, 2019
7
March, 2020
6
August, 2017
5
December, 2019
5
January, 2019
4
February, 2020
November, 2018
1
December, 2018
Available data
15
tsv
1
bedpe bed3+
1
hic
1
vcf
Organism
19
Homo sapiens
Biosample type
13
cell line
6
tissue
Organ
130
kidney
92
heart
13
liver
8
embryo
6
blood vessel
6
vasculature
5
connective tissue
4
pancreas
2
artery
2
epithelium
1
adipose tissue
Project
19
AMP
Genome assembly (visualization)
1
hg19
Lab
13
Bing Ren, UCSD
6
AMP-T2D consortium
assay_slims!
DNA binding
month_released!
November, 2018
BIOSAMPLE
ASSAY
19 results
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total RNA-seq
single cell RNA-seq
STARR-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
9
2
1
1
tissue
aorta
4
pulmonary artery
2
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