Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
8
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
DNA binding
16
Transcription
9
DNA accessibility
7
DNA methylation
Date released
321
February, 2021
291
May, 2020
275
August, 2021
234
May, 2021
204
February, 2023
200
May, 2022
186
June, 2019
168
July, 2018
108
August, 2017
96
July, 2019
71
October, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
November, 2019
47
September, 2023
41
September, 2018
23
February, 2020
19
April, 2020
17
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
14
May, 2023
10
December, 2019
7
August, 2020
7
January, 2018
7
October, 2017
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
32
fastq
31
bam
31
bigWig
15
tsv
9
bed narrowPeak
9
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
32
Homo sapiens
Biosample type
15
in vitro differentiated cells
15
tissue
1
cell line
1
primary cell
Organ
7
pancreas
4
embryo
4
liver
3
spleen
2
brain
adipose tissue
1
connective tissue
Project
32
AMP
Genome assembly (visualization)
30
GRCh38
24
hg19
Lab
32
AMP-T2D consortium
assay_slims!
DNA binding
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
tissue
body of pancreas
2
2
pancreas
2
1
spleen
1
2
brain
2
liver
2
+ See 1 more…
cell line
HepG2
1
primary cell
pancreatic cell
1
See all biosamples
Download