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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
DNase-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
196
DNA accessibility
DNA binding
27
Transcription
Date released
647
February, 2021
291
May, 2020
270
August, 2021
234
May, 2021
200
May, 2022
182
June, 2019
170
February, 2023
168
July, 2018
115
August, 2017
97
July, 2019
65
October, 2019
59
September, 2020
57
March, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
22
February, 2020
19
April, 2020
18
November, 2018
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2021
8
October, 2017
7
August, 2020
7
January, 2018
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
222
bam
222
bigWig
196
bed narrowPeak
196
bigBed narrowPeak
182
bed bed3+
182
bed broadPeak
182
bigBed broadPeak
41
fastq
26
tsv
1
csv
Organism
223
Homo sapiens
Biosample type
160
tissue
63
primary cell
Organ
78
kidney
54
epithelium
44
pancreas
33
musculature of body
32
limb
30
brain
30
heart
18
ureter
7
vasculature
6
connective tissue
blood vessel
4
eye
2
artery
2
liver
1
adipose tissue
Project
223
AMP
Genome assembly (visualization)
222
GRCh38
200
hg19
Lab
223
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_slims!
DNA binding
organ_slims!
blood vessel
bodily fluid
BIOSAMPLE
ASSAY
223 results
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Clear Filters
DNase-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 32 more…
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
cardiac fibroblast
3
+ See 18 more…
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