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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
DNase-seq
3
Hi-C
1
ATAC-seq
1
FAIRE-seq
1
pCHi-C
1
total RNA-seq
Assay category
DNA binding
6
DNA accessibility
3
3D chromatin structure
1
Transcription
Date released
60
February, 2021
35
February, 2023
12
July, 2019
7
June, 2019
7
October, 2019
6
August, 2021
4
March, 2020
3
February, 2020
Available data
7
bam
7
bigWig
6
bed narrowPeak
5
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
3
hic
2
bedpe bed3+
2
tsv
1
tar
Organism
11
Homo sapiens
Biosample type
6
tissue
5
primary cell
Organ
19
eye
16
epithelium
16
pancreas
11
blood vessel
11
kidney
11
vasculature
10
heart
10
limb
7
nerve
5
connective tissue
5
liver
5
musculature of body
5
vein
4
brain
3
artery
2
adipose tissue
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
10
hg19
6
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
DNA binding
month_released!
May, 2021
BIOSAMPLE
ASSAY
11 results
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Clear Filters
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
pCHi-C
total RNA-seq
tissue
aorta
1
1
1
tibial artery
2
1
primary cell
endothelial cell of umbilical vein
2
2
1
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