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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 34ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • DNA binding
  • 34DNA accessibility
  • 1DNA methylation
Date released
  • 707February, 2021
  • 291May, 2020
  • 276August, 2021
  • 234May, 2021
  • 205February, 2023
  • 200May, 2022
  • 187June, 2019
  • 168July, 2018
  • 115August, 2017
  • 108July, 2019
  • 72October, 2019
  • 61March, 2020
  • 59September, 2020
  • 49April, 2018
  • 48November, 2019
  • 47September, 2023
  • 41September, 2018
  • 25February, 2020
  • 19April, 2020
  • 18November, 2018
  • 16January, 2021
  • 16November, 2020
  • 15February, 2018
  • 15May, 2023
  • 10December, 2019
  • 8January, 2018
  • 8October, 2017
  • 7August, 2020
  • 5January, 2019
  • 5March, 2019
  • 5March, 2023
  • 5September, 2017
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 2October, 2018
  • 1August, 2022
  • 1December, 2018
Available data
  • 186bam
  • 180bigWig
  • 173tsv
  • 13bed narrowPeak
  • 2bed bed3+
Organism
  • 234Homo sapiens
Biosample type
  • 89in vitro differentiated cells
  • 85primary cell
  • 40tissue
  • 20cell line
Organ
  • 57pancreas
  • 22epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 166AMP
  • 68T1D
Genome assembly (visualization)
  • 193hg19
  • 186GRCh38
Lab
  • 153AMP-T2D consortium
  • 81Kyle Gaulton, UCSD
Audit category:
  • 86inconsistent ontology term
assay_slims!
  • DNA binding
BIOSAMPLE
ASSAY

234 results

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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
in vitro differentiated cells
cardiomyocytes59
embryonic stem cell55
induced pluripotent stem cell9
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
primary cell
monocyte521311
CD8-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
B cell1
activated CD4-positive, alpha-beta T cell1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH1416
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