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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
8
snATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
DNA binding
21
DNA accessibility
4
Transcription
Date released
8
February, 2021
8
February, 2023
8
January, 2021
1
January, 2018
1
March, 2020
Available data
8
bam
8
bed narrowPeak
4
bed bed3
4
txt
1
bigWig
1
tsv
Organism
26
Homo sapiens
Biosample type
16
tissue
8
primary cell
2
cell line
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
18
AMP
8
T1D
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
18
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
26 results
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ATAC-seq
snATAC-seq
total RNA-seq
pCHi-C
tissue
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
distal epiphysis
1
+ See 7 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
MCF-7
1
See all biosamples
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